Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmga2P52927 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hmga2P52927 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.96■□□□□ 0.31
Hmga2P52927 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmga2P52927 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hmga2P52927 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Hmga2P52927 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmga2P52927 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Hmga2P52927 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmga2P52927 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.94■□□□□ 0.3
Hmga2P52927 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hmga2P52927 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hmga2P52927 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hmga2P52927 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hmga2P52927 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmga2P52927 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Hmga2P52927 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmga2P52927 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmga2P52927 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.91■□□□□ 0.3
Hmga2P52927 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmga2P52927 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hmga2P52927 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hmga2P52927 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hmga2P52927 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmga2P52927 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.9■□□□□ 0.3
Hmga2P52927 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmga2P52927 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmga2P52927 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmga2P52927 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmga2P52927 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmga2P52927 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmga2P52927 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmga2P52927 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hmga2P52927 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmga2P52927 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hmga2P52927 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.89■□□□□ 0.29
Hmga2P52927 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmga2P52927 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hmga2P52927 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmga2P52927 Golph3-205ENSMUST00000228671 2842 ntBASIC16.88■□□□□ 0.29
Hmga2P52927 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmga2P52927 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmga2P52927 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.88■□□□□ 0.29
Hmga2P52927 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmga2P52927 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hmga2P52927 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.88■□□□□ 0.29
Hmga2P52927 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmga2P52927 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.88■□□□□ 0.29
Hmga2P52927 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmga2P52927 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmga2P52927 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms