Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.74■■□□□ 1.07
Clcn3P51791 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Clcn3P51791 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.74■■□□□ 1.07
Clcn3P51791 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn3P51791 Gm10493-201ENSMUST00000097270 612 ntBASIC21.74■■□□□ 1.07
Clcn3P51791 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn3P51791 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn3P51791 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn3P51791 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn3P51791 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Clcn3P51791 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn3P51791 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn3P51791 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn3P51791 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Clcn3P51791 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn3P51791 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn3P51791 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
Clcn3P51791 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Clcn3P51791 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.73■■□□□ 1.07
Clcn3P51791 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Clcn3P51791 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Clcn3P51791 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn3P51791 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.72■■□□□ 1.07
Clcn3P51791 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.71■■□□□ 1.07
Clcn3P51791 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Clcn3P51791 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn3P51791 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Clcn3P51791 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.7■■□□□ 1.06
Clcn3P51791 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn3P51791 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.69■■□□□ 1.06
Clcn3P51791 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.69■■□□□ 1.06
Clcn3P51791 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.69■■□□□ 1.06
Clcn3P51791 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.69■■□□□ 1.06
Clcn3P51791 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.69■■□□□ 1.06
Clcn3P51791 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Clcn3P51791 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn3P51791 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Clcn3P51791 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.68■■□□□ 1.06
Clcn3P51791 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Clcn3P51791 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn3P51791 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn3P51791 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Clcn3P51791 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.67■■□□□ 1.06
Clcn3P51791 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn3P51791 Gm26571-201ENSMUST00000181399 666 ntBASIC21.67■■□□□ 1.06
Clcn3P51791 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn3P51791 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn3P51791 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn3P51791 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn3P51791 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn3P51791 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Clcn3P51791 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Clcn3P51791 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn3P51791 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Clcn3P51791 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.65■■□□□ 1.06
Clcn3P51791 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Clcn3P51791 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Clcn3P51791 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Clcn3P51791 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Clcn3P51791 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn3P51791 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Clcn3P51791 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Clcn3P51791 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.64■■□□□ 1.05
Clcn3P51791 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn3P51791 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms