Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atp6v1aP50516 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Atp6v1aP50516 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.09■■□□□ 1.45
Atp6v1aP50516 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1aP50516 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Atp6v1aP50516 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Atp6v1aP50516 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Atp6v1aP50516 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Atp6v1aP50516 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Atp6v1aP50516 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.06■■□□□ 1.44
Atp6v1aP50516 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Atp6v1aP50516 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.06■■□□□ 1.44
Atp6v1aP50516 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atp6v1aP50516 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atp6v1aP50516 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.05■■□□□ 1.44
Atp6v1aP50516 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Atp6v1aP50516 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atp6v1aP50516 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Atp6v1aP50516 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.05■■□□□ 1.44
Atp6v1aP50516 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atp6v1aP50516 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1aP50516 Gm27801-201ENSMUST00000184174 223 ntBASIC24.02■■□□□ 1.44
Atp6v1aP50516 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atp6v1aP50516 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Atp6v1aP50516 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
Atp6v1aP50516 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Atp6v1aP50516 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Gm7514-201ENSMUST00000209475 934 ntBASIC24.01■■□□□ 1.43
Atp6v1aP50516 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1aP50516 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Atp6v1aP50516 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24■■□□□ 1.43
Atp6v1aP50516 Ap3s1-204ENSMUST00000225520 957 ntBASIC24■■□□□ 1.43
Atp6v1aP50516 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1aP50516 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Atp6v1aP50516 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Atp6v1aP50516 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atp6v1aP50516 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atp6v1aP50516 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atp6v1aP50516 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Atp6v1aP50516 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atp6v1aP50516 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atp6v1aP50516 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atp6v1aP50516 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atp6v1aP50516 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Atp6v1aP50516 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Atp6v1aP50516 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Atp6v1aP50516 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp6v1aP50516 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.95■■□□□ 1.43
Atp6v1aP50516 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Atp6v1aP50516 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Atp6v1aP50516 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms