Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-6P43688 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.85■□□□□ 0.61
Nkx2-6P43688 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx2-6P43688 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.84■□□□□ 0.61
Nkx2-6P43688 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.84■□□□□ 0.61
Nkx2-6P43688 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-6P43688 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-6P43688 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-6P43688 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-6P43688 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-6P43688 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-6P43688 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-6P43688 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-6P43688 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.83■□□□□ 0.6
Nkx2-6P43688 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-6P43688 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Nkx2-6P43688 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.82■□□□□ 0.6
Nkx2-6P43688 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-6P43688 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Mir6236-201ENSMUST00000184437 123 ntBASIC18.81■□□□□ 0.6
Nkx2-6P43688 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Nkx2-6P43688 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Nkx2-6P43688 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Nkx2-6P43688 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Gm40848-201ENSMUST00000221998 324 ntBASIC18.81■□□□□ 0.6
Nkx2-6P43688 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-6P43688 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Gm7291-201ENSMUST00000199147 382 ntBASIC18.8■□□□□ 0.6
Nkx2-6P43688 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Nkx2-6P43688 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Gm27405-201ENSMUST00000184201 112 ntBASIC18.79■□□□□ 0.6
Nkx2-6P43688 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-6P43688 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Gm42642-201ENSMUST00000200683 355 ntBASIC18.78■□□□□ 0.6
Nkx2-6P43688 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms