Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.37■□□□□ 0.21
Hist1h1aP43275 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1aP43275 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Gm5921-201ENSMUST00000075898 882 ntBASIC16.36■□□□□ 0.21
Hist1h1aP43275 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hist1h1aP43275 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hist1h1aP43275 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1aP43275 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.36■□□□□ 0.21
Hist1h1aP43275 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Gm43566-201ENSMUST00000196851 808 ntBASIC16.35■□□□□ 0.21
Hist1h1aP43275 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1aP43275 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Hist1h1aP43275 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hist1h1aP43275 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Gm13238-201ENSMUST00000117655 780 ntBASIC16.33■□□□□ 0.2
Hist1h1aP43275 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.33■□□□□ 0.2
Hist1h1aP43275 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1aP43275 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.32■□□□□ 0.2
Hist1h1aP43275 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Hist1h1aP43275 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Gm10399-202ENSMUST00000202768 748 ntBASIC16.32■□□□□ 0.2
Hist1h1aP43275 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1aP43275 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hist1h1aP43275 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hist1h1aP43275 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.29■□□□□ 0.2
Hist1h1aP43275 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms