Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.05■□□□□ 0.96
Gdf6P43028 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gdf6P43028 Gm10493-201ENSMUST00000097270 612 ntBASIC21.05■□□□□ 0.96
Gdf6P43028 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gdf6P43028 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.04■□□□□ 0.96
Gdf6P43028 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Gdf6P43028 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.04■□□□□ 0.96
Gdf6P43028 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Gdf6P43028 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gdf6P43028 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gdf6P43028 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.03■□□□□ 0.96
Gdf6P43028 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gdf6P43028 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gdf6P43028 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Gdf6P43028 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gdf6P43028 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Gdf6P43028 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gdf6P43028 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.02■□□□□ 0.96
Gdf6P43028 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.02■□□□□ 0.96
Gdf6P43028 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Gdf6P43028 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gdf6P43028 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Gdf6P43028 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gdf6P43028 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gdf6P43028 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gdf6P43028 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gdf6P43028 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gdf6P43028 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.01■□□□□ 0.95
Gdf6P43028 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gdf6P43028 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.01■□□□□ 0.95
Gdf6P43028 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.01■□□□□ 0.95
Gdf6P43028 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gdf6P43028 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gdf6P43028 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gdf6P43028 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gdf6P43028 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.01■□□□□ 0.95
Gdf6P43028 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gdf6P43028 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Gdf6P43028 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21■□□□□ 0.95
Gdf6P43028 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gdf6P43028 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gdf6P43028 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Gdf6P43028 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gdf6P43028 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Gdf6P43028 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Gdf6P43028 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Gdf6P43028 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gdf6P43028 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gdf6P43028 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
Gdf6P43028 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gdf6P43028 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Gdf6P43028 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gdf6P43028 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gdf6P43028 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.98■□□□□ 0.95
Gdf6P43028 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.98■□□□□ 0.95
Gdf6P43028 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.98■□□□□ 0.95
Gdf6P43028 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gdf6P43028 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gdf6P43028 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gdf6P43028 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.97■□□□□ 0.95
Gdf6P43028 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Gdf6P43028 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.97■□□□□ 0.95
Gdf6P43028 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gdf6P43028 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Gdf6P43028 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.96■□□□□ 0.95
Gdf6P43028 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gdf6P43028 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gdf6P43028 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gdf6P43028 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.96■□□□□ 0.95
Gdf6P43028 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.96■□□□□ 0.95
Gdf6P43028 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms