Protein–RNA interactions for Protein: P41234

Abca2, ATP-binding cassette sub-family A member 2, mousemouse

Predictions only

Length 2,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca2P41234 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.44■□□□□ 0.22
Abca2P41234 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca2P41234 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abca2P41234 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Abca2P41234 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca2P41234 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.43■□□□□ 0.22
Abca2P41234 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.42■□□□□ 0.22
Abca2P41234 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.42■□□□□ 0.22
Abca2P41234 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Gm13168-201ENSMUST00000121771 632 ntBASIC16.42■□□□□ 0.22
Abca2P41234 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.42■□□□□ 0.22
Abca2P41234 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Abca2P41234 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca2P41234 Mir5133-201ENSMUST00000174955 77 ntBASIC16.41■□□□□ 0.22
Abca2P41234 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Abca2P41234 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Abca2P41234 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Abca2P41234 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca2P41234 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Abca2P41234 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Abca2P41234 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.4■□□□□ 0.22
Abca2P41234 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Gm10812-201ENSMUST00000099864 546 ntBASIC16.4■□□□□ 0.22
Abca2P41234 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Abca2P41234 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.4■□□□□ 0.22
Abca2P41234 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.4■□□□□ 0.22
Abca2P41234 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca2P41234 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.39■□□□□ 0.21
Abca2P41234 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Abca2P41234 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
Abca2P41234 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca2P41234 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca2P41234 Gm13234-201ENSMUST00000120010 747 ntBASIC16.38■□□□□ 0.21
Abca2P41234 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.38■□□□□ 0.21
Abca2P41234 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.38■□□□□ 0.21
Abca2P41234 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.38■□□□□ 0.21
Abca2P41234 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca2P41234 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca2P41234 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca2P41234 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Abca2P41234 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca2P41234 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Abca2P41234 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Abca2P41234 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.37■□□□□ 0.21
Abca2P41234 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Abca2P41234 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca2P41234 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.37■□□□□ 0.21
Abca2P41234 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.36■□□□□ 0.21
Abca2P41234 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abca2P41234 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms