Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sox6P40645 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox6P40645 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox6P40645 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.59■□□□□ 0.57
Sox6P40645 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox6P40645 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sox6P40645 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox6P40645 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox6P40645 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox6P40645 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sox6P40645 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox6P40645 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox6P40645 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
Sox6P40645 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sox6P40645 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox6P40645 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox6P40645 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sox6P40645 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox6P40645 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox6P40645 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sox6P40645 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.57■□□□□ 0.56
Sox6P40645 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.57■□□□□ 0.56
Sox6P40645 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sox6P40645 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox6P40645 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox6P40645 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sox6P40645 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sox6P40645 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Gm45102-201ENSMUST00000207427 857 ntBASIC18.56■□□□□ 0.56
Sox6P40645 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox6P40645 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sox6P40645 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sox6P40645 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox6P40645 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.55■□□□□ 0.56
Sox6P40645 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.55■□□□□ 0.56
Sox6P40645 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sox6P40645 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox6P40645 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox6P40645 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.55■□□□□ 0.56
Sox6P40645 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Gm14117-201ENSMUST00000122417 843 ntBASIC18.54■□□□□ 0.56
Sox6P40645 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox6P40645 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox6P40645 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.54■□□□□ 0.56
Sox6P40645 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox6P40645 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.53■□□□□ 0.56
Sox6P40645 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.53■□□□□ 0.56
Sox6P40645 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.53■□□□□ 0.56
Sox6P40645 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox6P40645 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Sox6P40645 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox6P40645 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sox6P40645 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox6P40645 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.52■□□□□ 0.56
Sox6P40645 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox6P40645 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sox6P40645 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox6P40645 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox6P40645 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms