Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
LdlrP35951 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LdlrP35951 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.79■□□□□ 0.76
LdlrP35951 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.79■□□□□ 0.76
LdlrP35951 Gm22238-201ENSMUST00000175222 88 ntBASIC19.79■□□□□ 0.76
LdlrP35951 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LdlrP35951 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LdlrP35951 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LdlrP35951 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.78■□□□□ 0.76
LdlrP35951 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.78■□□□□ 0.76
LdlrP35951 Serp2-204ENSMUST00000228055 705 ntBASIC19.78■□□□□ 0.76
LdlrP35951 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LdlrP35951 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.77■□□□□ 0.76
LdlrP35951 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.77■□□□□ 0.76
LdlrP35951 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LdlrP35951 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
LdlrP35951 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LdlrP35951 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
LdlrP35951 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LdlrP35951 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LdlrP35951 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.75■□□□□ 0.75
LdlrP35951 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.75■□□□□ 0.75
LdlrP35951 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.75■□□□□ 0.75
LdlrP35951 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LdlrP35951 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LdlrP35951 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LdlrP35951 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LdlrP35951 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LdlrP35951 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LdlrP35951 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LdlrP35951 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LdlrP35951 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.74■□□□□ 0.75
LdlrP35951 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LdlrP35951 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.73■□□□□ 0.75
LdlrP35951 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Gm40881-201ENSMUST00000223397 166 ntBASIC19.73■□□□□ 0.75
LdlrP35951 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LdlrP35951 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LdlrP35951 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LdlrP35951 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
LdlrP35951 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.72■□□□□ 0.75
LdlrP35951 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.72■□□□□ 0.75
LdlrP35951 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LdlrP35951 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LdlrP35951 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LdlrP35951 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LdlrP35951 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.71■□□□□ 0.75
LdlrP35951 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LdlrP35951 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.7■□□□□ 0.74
LdlrP35951 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LdlrP35951 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.7■□□□□ 0.74
LdlrP35951 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms