Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Thbs1P35441 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Thbs1P35441 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Thbs1P35441 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.43■□□□□ 0.54
Thbs1P35441 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
Thbs1P35441 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Thbs1P35441 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Thbs1P35441 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Thbs1P35441 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Thbs1P35441 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Thbs1P35441 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.42■□□□□ 0.54
Thbs1P35441 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thbs1P35441 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.42■□□□□ 0.54
Thbs1P35441 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Thbs1P35441 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thbs1P35441 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Thbs1P35441 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Thbs1P35441 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thbs1P35441 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thbs1P35441 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thbs1P35441 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Thbs1P35441 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.41■□□□□ 0.54
Thbs1P35441 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Thbs1P35441 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Thbs1P35441 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Thbs1P35441 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.4■□□□□ 0.54
Thbs1P35441 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Thbs1P35441 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Thbs1P35441 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Thbs1P35441 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Thbs1P35441 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thbs1P35441 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thbs1P35441 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.39■□□□□ 0.53
Thbs1P35441 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.39■□□□□ 0.53
Thbs1P35441 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Thbs1P35441 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Thbs1P35441 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Thbs1P35441 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.38■□□□□ 0.53
Thbs1P35441 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.38■□□□□ 0.53
Thbs1P35441 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.38■□□□□ 0.53
Thbs1P35441 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Thbs1P35441 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thbs1P35441 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.37■□□□□ 0.53
Thbs1P35441 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thbs1P35441 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.36■□□□□ 0.53
Thbs1P35441 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thbs1P35441 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.35■□□□□ 0.53
Thbs1P35441 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.35■□□□□ 0.53
Thbs1P35441 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thbs1P35441 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.35■□□□□ 0.53
Thbs1P35441 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thbs1P35441 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Thbs1P35441 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thbs1P35441 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thbs1P35441 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Thbs1P35441 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thbs1P35441 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.34■□□□□ 0.53
Thbs1P35441 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
Thbs1P35441 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Thbs1P35441 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Thbs1P35441 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.34■□□□□ 0.53
Thbs1P35441 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thbs1P35441 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms