Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nfkb1P25799 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.5■□□□□ 0.87
Nfkb1P25799 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nfkb1P25799 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nfkb1P25799 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nfkb1P25799 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nfkb1P25799 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Nfkb1P25799 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.48■□□□□ 0.87
Nfkb1P25799 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.48■□□□□ 0.87
Nfkb1P25799 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nfkb1P25799 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.48■□□□□ 0.87
Nfkb1P25799 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nfkb1P25799 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nfkb1P25799 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nfkb1P25799 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Nfkb1P25799 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.47■□□□□ 0.87
Nfkb1P25799 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.47■□□□□ 0.87
Nfkb1P25799 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nfkb1P25799 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nfkb1P25799 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nfkb1P25799 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nfkb1P25799 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nfkb1P25799 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nfkb1P25799 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nfkb1P25799 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nfkb1P25799 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nfkb1P25799 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nfkb1P25799 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nfkb1P25799 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nfkb1P25799 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nfkb1P25799 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nfkb1P25799 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.43■□□□□ 0.86
Nfkb1P25799 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Nfkb1P25799 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nfkb1P25799 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.42■□□□□ 0.86
Nfkb1P25799 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.42■□□□□ 0.86
Nfkb1P25799 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
Nfkb1P25799 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nfkb1P25799 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nfkb1P25799 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nfkb1P25799 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.41■□□□□ 0.86
Nfkb1P25799 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Nfkb1P25799 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
Nfkb1P25799 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nfkb1P25799 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Nfkb1P25799 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nfkb1P25799 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nfkb1P25799 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nfkb1P25799 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.4■□□□□ 0.86
Nfkb1P25799 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nfkb1P25799 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.4■□□□□ 0.86
Nfkb1P25799 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.4■□□□□ 0.86
Nfkb1P25799 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nfkb1P25799 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nfkb1P25799 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nfkb1P25799 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nfkb1P25799 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nfkb1P25799 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nfkb1P25799 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms