Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hmgn1P18608 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Hmgn1P18608 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.23■□□□□ 0.51
Hmgn1P18608 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Hmgn1P18608 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.22■□□□□ 0.51
Hmgn1P18608 Mir6538-201ENSMUST00000183713 110 ntBASIC18.22■□□□□ 0.51
Hmgn1P18608 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.22■□□□□ 0.51
Hmgn1P18608 Gm45444-201ENSMUST00000211394 898 ntBASIC18.22■□□□□ 0.51
Hmgn1P18608 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn1P18608 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn1P18608 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgn1P18608 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Gm10399-202ENSMUST00000202768 748 ntBASIC18.2■□□□□ 0.5
Hmgn1P18608 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.2■□□□□ 0.5
Hmgn1P18608 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.2■□□□□ 0.5
Hmgn1P18608 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn1P18608 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.19■□□□□ 0.5
Hmgn1P18608 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn1P18608 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn1P18608 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn1P18608 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn1P18608 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.18■□□□□ 0.5
Hmgn1P18608 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.18■□□□□ 0.5
Hmgn1P18608 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn1P18608 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn1P18608 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmgn1P18608 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Hmgn1P18608 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgn1P18608 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgn1P18608 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.17■□□□□ 0.5
Hmgn1P18608 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn1P18608 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmgn1P18608 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn1P18608 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn1P18608 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgn1P18608 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn1P18608 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgn1P18608 Gm7143-201ENSMUST00000222811 859 ntBASIC18.15■□□□□ 0.5
Hmgn1P18608 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgn1P18608 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn1P18608 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hmgn1P18608 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn1P18608 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn1P18608 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms