Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.74■□□□□ 0.59
Nid1P10493 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Nid1P10493 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nid1P10493 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nid1P10493 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Gm22238-201ENSMUST00000175222 88 ntBASIC18.73■□□□□ 0.59
Nid1P10493 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.73■□□□□ 0.59
Nid1P10493 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.73■□□□□ 0.59
Nid1P10493 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nid1P10493 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nid1P10493 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nid1P10493 Golph3-202ENSMUST00000226517 2359 ntBASIC18.72■□□□□ 0.59
Nid1P10493 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nid1P10493 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nid1P10493 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Nid1P10493 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.71■□□□□ 0.59
Nid1P10493 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.71■□□□□ 0.59
Nid1P10493 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.71■□□□□ 0.59
Nid1P10493 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nid1P10493 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nid1P10493 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Nid1P10493 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.7■□□□□ 0.58
Nid1P10493 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.7■□□□□ 0.58
Nid1P10493 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nid1P10493 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nid1P10493 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
Nid1P10493 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nid1P10493 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.69■□□□□ 0.58
Nid1P10493 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.69■□□□□ 0.58
Nid1P10493 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nid1P10493 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.68■□□□□ 0.58
Nid1P10493 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.68■□□□□ 0.58
Nid1P10493 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nid1P10493 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nid1P10493 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.67■□□□□ 0.58
Nid1P10493 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.67■□□□□ 0.58
Nid1P10493 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nid1P10493 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.66■□□□□ 0.58
Nid1P10493 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nid1P10493 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nid1P10493 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nid1P10493 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nid1P10493 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nid1P10493 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nid1P10493 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Nid1P10493 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nid1P10493 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.65■□□□□ 0.58
Nid1P10493 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.65■□□□□ 0.58
Nid1P10493 Gm45102-201ENSMUST00000207427 857 ntBASIC18.65■□□□□ 0.58
Nid1P10493 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nid1P10493 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms