Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
P04224 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Gm7332-201ENSMUST00000118351 454 ntBASIC17.37■□□□□ 0.37
P04224 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.37■□□□□ 0.37
P04224 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
P04224 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.37■□□□□ 0.37
P04224 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
P04224 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.37■□□□□ 0.37
P04224 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
P04224 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04224 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04224 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.36■□□□□ 0.37
P04224 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.36■□□□□ 0.37
P04224 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04224 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.36■□□□□ 0.37
P04224 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
P04224 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04224 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
P04224 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
P04224 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.35■□□□□ 0.37
P04224 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04224 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
P04224 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.34■□□□□ 0.37
P04224 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
P04224 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04224 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04224 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
P04224 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
P04224 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
P04224 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.33■□□□□ 0.36
P04224 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.33■□□□□ 0.36
P04224 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
P04224 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
P04224 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
P04224 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04224 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.32■□□□□ 0.36
P04224 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04224 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P04224 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
P04224 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.31■□□□□ 0.36
P04224 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
P04224 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P04224 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P04224 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms