Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CopeO89079 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CopeO89079 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.54■□□□□ 0.88
CopeO89079 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CopeO89079 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CopeO89079 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CopeO89079 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.53■□□□□ 0.88
CopeO89079 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CopeO89079 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.53■□□□□ 0.88
CopeO89079 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CopeO89079 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CopeO89079 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CopeO89079 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CopeO89079 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.52■□□□□ 0.88
CopeO89079 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.52■□□□□ 0.88
CopeO89079 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CopeO89079 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
CopeO89079 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CopeO89079 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CopeO89079 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CopeO89079 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.51■□□□□ 0.87
CopeO89079 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CopeO89079 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.5■□□□□ 0.87
CopeO89079 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
CopeO89079 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CopeO89079 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.5■□□□□ 0.87
CopeO89079 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CopeO89079 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.49■□□□□ 0.87
CopeO89079 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.49■□□□□ 0.87
CopeO89079 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.49■□□□□ 0.87
CopeO89079 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.49■□□□□ 0.87
CopeO89079 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CopeO89079 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Gm43566-201ENSMUST00000196851 808 ntBASIC20.48■□□□□ 0.87
CopeO89079 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CopeO89079 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CopeO89079 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.47■□□□□ 0.87
CopeO89079 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CopeO89079 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.46■□□□□ 0.87
CopeO89079 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.46■□□□□ 0.87
CopeO89079 Gm13238-201ENSMUST00000117655 780 ntBASIC20.46■□□□□ 0.87
CopeO89079 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CopeO89079 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CopeO89079 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CopeO89079 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.45■□□□□ 0.86
CopeO89079 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CopeO89079 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CopeO89079 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms