Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.71■□□□□ 0.43
Hdac3O88895 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac3O88895 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hdac3O88895 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac3O88895 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Hdac3O88895 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.7■□□□□ 0.42
Hdac3O88895 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Hdac3O88895 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac3O88895 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac3O88895 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac3O88895 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac3O88895 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hdac3O88895 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hdac3O88895 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hdac3O88895 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hdac3O88895 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.69■□□□□ 0.42
Hdac3O88895 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.69■□□□□ 0.42
Hdac3O88895 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.69■□□□□ 0.42
Hdac3O88895 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hdac3O88895 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Hdac3O88895 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hdac3O88895 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac3O88895 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hdac3O88895 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.68■□□□□ 0.42
Hdac3O88895 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac3O88895 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac3O88895 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac3O88895 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.67■□□□□ 0.42
Hdac3O88895 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hdac3O88895 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.67■□□□□ 0.42
Hdac3O88895 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac3O88895 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
Hdac3O88895 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hdac3O88895 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hdac3O88895 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac3O88895 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hdac3O88895 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.65■□□□□ 0.42
Hdac3O88895 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac3O88895 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac3O88895 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac3O88895 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.65■□□□□ 0.42
Hdac3O88895 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hdac3O88895 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Hdac3O88895 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac3O88895 Gm9870-201ENSMUST00000063874 645 ntBASIC17.65■□□□□ 0.42
Hdac3O88895 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.65■□□□□ 0.42
Hdac3O88895 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac3O88895 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac3O88895 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hdac3O88895 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hdac3O88895 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac3O88895 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.64■□□□□ 0.41
Hdac3O88895 Gm22238-201ENSMUST00000175222 88 ntBASIC17.64■□□□□ 0.41
Hdac3O88895 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac3O88895 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac3O88895 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac3O88895 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Hdac3O88895 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 Gm14117-201ENSMUST00000122417 843 ntBASIC17.63■□□□□ 0.41
Hdac3O88895 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.63■□□□□ 0.41
Hdac3O88895 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hdac3O88895 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.63■□□□□ 0.41
Hdac3O88895 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac3O88895 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.62■□□□□ 0.41
Hdac3O88895 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms