Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2d1aO88890 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.02□□□□□ -0.17
Sh2d1aO88890 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.02□□□□□ -0.17
Sh2d1aO88890 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sh2d1aO88890 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2d1aO88890 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sh2d1aO88890 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14□□□□□ -0.17
Sh2d1aO88890 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14□□□□□ -0.17
Sh2d1aO88890 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Gm9959-201ENSMUST00000068277 390 ntBASIC14□□□□□ -0.17
Sh2d1aO88890 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sh2d1aO88890 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sh2d1aO88890 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sh2d1aO88890 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.99□□□□□ -0.17
Sh2d1aO88890 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sh2d1aO88890 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sh2d1aO88890 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Gm7143-201ENSMUST00000222811 859 ntBASIC13.97□□□□□ -0.17
Sh2d1aO88890 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh2d1aO88890 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh2d1aO88890 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms