Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.31■□□□□ 0.52
Cops4O88544 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cops4O88544 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops4O88544 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cops4O88544 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops4O88544 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cops4O88544 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.31■□□□□ 0.52
Cops4O88544 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops4O88544 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops4O88544 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cops4O88544 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cops4O88544 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cops4O88544 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops4O88544 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cops4O88544 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.29■□□□□ 0.52
Cops4O88544 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cops4O88544 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.29■□□□□ 0.52
Cops4O88544 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.29■□□□□ 0.52
Cops4O88544 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops4O88544 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.28■□□□□ 0.52
Cops4O88544 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.28■□□□□ 0.52
Cops4O88544 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.28■□□□□ 0.52
Cops4O88544 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops4O88544 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.27■□□□□ 0.52
Cops4O88544 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cops4O88544 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.27■□□□□ 0.52
Cops4O88544 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cops4O88544 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cops4O88544 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cops4O88544 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cops4O88544 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cops4O88544 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cops4O88544 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cops4O88544 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cops4O88544 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cops4O88544 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cops4O88544 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.25■□□□□ 0.51
Cops4O88544 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cops4O88544 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.24■□□□□ 0.51
Cops4O88544 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.24■□□□□ 0.51
Cops4O88544 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cops4O88544 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.23■□□□□ 0.51
Cops4O88544 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.23■□□□□ 0.51
Cops4O88544 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cops4O88544 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms