Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cacna1hO88427 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Cacna1hO88427 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.72■□□□□ 0.75
Cacna1hO88427 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1hO88427 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cacna1hO88427 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.71■□□□□ 0.75
Cacna1hO88427 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cacna1hO88427 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1hO88427 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Cacna1hO88427 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cacna1hO88427 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1hO88427 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1hO88427 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Gm13146-201ENSMUST00000118508 780 ntBASIC19.69■□□□□ 0.74
Cacna1hO88427 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1hO88427 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.69■□□□□ 0.74
Cacna1hO88427 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1hO88427 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1hO88427 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Cacna1hO88427 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cacna1hO88427 Gm27275-201ENSMUST00000184318 272 ntBASIC19.68■□□□□ 0.74
Cacna1hO88427 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1hO88427 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1hO88427 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1hO88427 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.67■□□□□ 0.74
Cacna1hO88427 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Cacna1hO88427 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1hO88427 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1hO88427 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1hO88427 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cacna1hO88427 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1hO88427 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1hO88427 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cacna1hO88427 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1hO88427 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cacna1hO88427 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1hO88427 Gm9987-201ENSMUST00000069768 567 ntBASIC19.66■□□□□ 0.74
Cacna1hO88427 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1hO88427 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1hO88427 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cacna1hO88427 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.65■□□□□ 0.74
Cacna1hO88427 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.65■□□□□ 0.74
Cacna1hO88427 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna1hO88427 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna1hO88427 Gm27741-201ENSMUST00000185060 237 ntBASIC19.64■□□□□ 0.74
Cacna1hO88427 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.64■□□□□ 0.73
Cacna1hO88427 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.64■□□□□ 0.73
Cacna1hO88427 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.64■□□□□ 0.73
Cacna1hO88427 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.64■□□□□ 0.73
Cacna1hO88427 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna1hO88427 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cacna1hO88427 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.64■□□□□ 0.73
Cacna1hO88427 Gm37055-201ENSMUST00000191866 133 ntBASIC19.63■□□□□ 0.73
Cacna1hO88427 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.63■□□□□ 0.73
Cacna1hO88427 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1hO88427 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1hO88427 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna1hO88427 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna1hO88427 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cacna1hO88427 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cacna1hO88427 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.62■□□□□ 0.73
Cacna1hO88427 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms