Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.13■□□□□ 0.97
Ttc3O88196 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.13■□□□□ 0.97
Ttc3O88196 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.12■□□□□ 0.97
Ttc3O88196 Gm42642-201ENSMUST00000200683 355 ntBASIC21.12■□□□□ 0.97
Ttc3O88196 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.12■□□□□ 0.97
Ttc3O88196 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ttc3O88196 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc3O88196 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.11■□□□□ 0.97
Ttc3O88196 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc3O88196 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.11■□□□□ 0.97
Ttc3O88196 Gm29257-201ENSMUST00000186115 639 ntBASIC21.11■□□□□ 0.97
Ttc3O88196 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc3O88196 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc3O88196 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Gm27801-201ENSMUST00000184174 223 ntBASIC21.1■□□□□ 0.97
Ttc3O88196 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.1■□□□□ 0.97
Ttc3O88196 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ttc3O88196 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.1■□□□□ 0.97
Ttc3O88196 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ttc3O88196 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.1■□□□□ 0.97
Ttc3O88196 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc3O88196 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc3O88196 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.09■□□□□ 0.97
Ttc3O88196 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc3O88196 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Ttc3O88196 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Ttc3O88196 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ttc3O88196 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc3O88196 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc3O88196 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.08■□□□□ 0.97
Ttc3O88196 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ttc3O88196 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc3O88196 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ttc3O88196 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ttc3O88196 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ttc3O88196 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc3O88196 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.07■□□□□ 0.96
Ttc3O88196 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.07■□□□□ 0.96
Ttc3O88196 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ttc3O88196 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc3O88196 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc3O88196 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc3O88196 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc3O88196 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ttc3O88196 Gm37179-201ENSMUST00000194862 823 ntBASIC21.06■□□□□ 0.96
Ttc3O88196 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.06■□□□□ 0.96
Ttc3O88196 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc3O88196 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ttc3O88196 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc3O88196 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc3O88196 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ttc3O88196 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc3O88196 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.05■□□□□ 0.96
Ttc3O88196 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.05■□□□□ 0.96
Ttc3O88196 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.04■□□□□ 0.96
Ttc3O88196 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc3O88196 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ttc3O88196 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Ttc3O88196 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc3O88196 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Gm42569-201ENSMUST00000200539 472 ntBASIC21.03■□□□□ 0.96
Ttc3O88196 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ttc3O88196 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.03■□□□□ 0.96
Ttc3O88196 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ttc3O88196 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc3O88196 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc3O88196 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.02■□□□□ 0.96
Ttc3O88196 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc3O88196 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc3O88196 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms