Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Ubr1O70481 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Ubr1O70481 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ubr1O70481 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ubr1O70481 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC26.39■■□□□ 1.82
Ubr1O70481 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Ubr1O70481 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.38■■□□□ 1.81
Ubr1O70481 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr1O70481 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.38■■□□□ 1.81
Ubr1O70481 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr1O70481 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Ubr1O70481 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.38■■□□□ 1.81
Ubr1O70481 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC26.38■■□□□ 1.81
Ubr1O70481 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC26.38■■□□□ 1.81
Ubr1O70481 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr1O70481 Gm9988-201ENSMUST00000069786 435 ntBASIC26.38■■□□□ 1.81
Ubr1O70481 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr1O70481 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Ubr1O70481 Gm42778-201ENSMUST00000199644 553 ntBASIC26.37■■□□□ 1.81
Ubr1O70481 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr1O70481 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr1O70481 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr1O70481 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr1O70481 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.35■■□□□ 1.81
Ubr1O70481 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ubr1O70481 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ubr1O70481 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr1O70481 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr1O70481 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr1O70481 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr1O70481 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr1O70481 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Ubr1O70481 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr1O70481 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr1O70481 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr1O70481 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr1O70481 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr1O70481 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr1O70481 Gm12933-201ENSMUST00000120203 872 ntBASIC26.32■■□□□ 1.8
Ubr1O70481 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC26.32■■□□□ 1.8
Ubr1O70481 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr1O70481 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr1O70481 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr1O70481 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Ubr1O70481 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Ubr1O70481 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC26.31■■□□□ 1.8
Ubr1O70481 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr1O70481 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
Ubr1O70481 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr1O70481 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr1O70481 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.3■■□□□ 1.8
Ubr1O70481 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr1O70481 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Ubr1O70481 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 Gm12669-201ENSMUST00000122162 1009 ntBASIC26.29■■□□□ 1.8
Ubr1O70481 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Ubr1O70481 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr1O70481 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr1O70481 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr1O70481 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC26.28■■□□□ 1.8
Ubr1O70481 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.28■■□□□ 1.8
Ubr1O70481 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr1O70481 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Ubr1O70481 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr1O70481 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.28■■□□□ 1.8
Ubr1O70481 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr1O70481 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
Ubr1O70481 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Ubr1O70481 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC26.27■■□□□ 1.8
Ubr1O70481 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ubr1O70481 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr1O70481 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr1O70481 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr1O70481 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr1O70481 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr1O70481 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Spcs1-207ENSMUST00000228767 1008 ntBASIC26.25■■□□□ 1.79
Ubr1O70481 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr1O70481 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 CT010467.1-202ENSMUST00000205406 714 ntBASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms