Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdh12O55134 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdh12O55134 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh12O55134 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh12O55134 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh12O55134 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Pcdh12O55134 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.02■□□□□ 0.48
Pcdh12O55134 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdh12O55134 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh12O55134 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh12O55134 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdh12O55134 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh12O55134 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdh12O55134 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh12O55134 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh12O55134 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdh12O55134 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.01■□□□□ 0.47
Pcdh12O55134 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.01■□□□□ 0.47
Pcdh12O55134 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdh12O55134 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.01■□□□□ 0.47
Pcdh12O55134 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdh12O55134 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh12O55134 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh12O55134 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdh12O55134 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh12O55134 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdh12O55134 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdh12O55134 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh12O55134 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh12O55134 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdh12O55134 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.99■□□□□ 0.47
Pcdh12O55134 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh12O55134 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh12O55134 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh12O55134 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh12O55134 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh12O55134 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh12O55134 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdh12O55134 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh12O55134 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.97■□□□□ 0.47
Pcdh12O55134 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh12O55134 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh12O55134 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.96■□□□□ 0.47
Pcdh12O55134 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh12O55134 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh12O55134 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms