Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6dO55057 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.69■□□□□ 0.1
Pde6dO55057 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6dO55057 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.68■□□□□ 0.1
Pde6dO55057 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Pde6dO55057 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6dO55057 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pde6dO55057 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6dO55057 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pde6dO55057 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6dO55057 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Pde6dO55057 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.67■□□□□ 0.1
Pde6dO55057 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.67■□□□□ 0.1
Pde6dO55057 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pde6dO55057 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.67■□□□□ 0.1
Pde6dO55057 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6dO55057 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
Pde6dO55057 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.66■□□□□ 0.1
Pde6dO55057 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pde6dO55057 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pde6dO55057 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pde6dO55057 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pde6dO55057 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pde6dO55057 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pde6dO55057 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pde6dO55057 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pde6dO55057 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6dO55057 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.64■□□□□ 0.09
Pde6dO55057 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6dO55057 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6dO55057 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6dO55057 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pde6dO55057 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.63■□□□□ 0.09
Pde6dO55057 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pde6dO55057 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pde6dO55057 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.63■□□□□ 0.09
Pde6dO55057 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.63■□□□□ 0.09
Pde6dO55057 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pde6dO55057 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pde6dO55057 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pde6dO55057 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.62■□□□□ 0.09
Pde6dO55057 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms