Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SncaO55042 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SncaO55042 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
SncaO55042 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.47■□□□□ 0.23
SncaO55042 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.47■□□□□ 0.23
SncaO55042 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.47■□□□□ 0.23
SncaO55042 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SncaO55042 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SncaO55042 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SncaO55042 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.47■□□□□ 0.23
SncaO55042 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SncaO55042 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.46■□□□□ 0.23
SncaO55042 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SncaO55042 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SncaO55042 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SncaO55042 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.45■□□□□ 0.22
SncaO55042 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SncaO55042 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SncaO55042 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SncaO55042 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SncaO55042 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SncaO55042 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SncaO55042 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SncaO55042 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SncaO55042 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.44■□□□□ 0.22
SncaO55042 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SncaO55042 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SncaO55042 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SncaO55042 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.43■□□□□ 0.22
SncaO55042 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.43■□□□□ 0.22
SncaO55042 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.43■□□□□ 0.22
SncaO55042 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SncaO55042 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.43■□□□□ 0.22
SncaO55042 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SncaO55042 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Gm13238-201ENSMUST00000117655 780 ntBASIC16.42■□□□□ 0.22
SncaO55042 Gm10232-201ENSMUST00000089221 720 ntBASIC16.42■□□□□ 0.22
SncaO55042 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SncaO55042 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SncaO55042 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.41■□□□□ 0.22
SncaO55042 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SncaO55042 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.41■□□□□ 0.22
SncaO55042 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.41■□□□□ 0.22
SncaO55042 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SncaO55042 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SncaO55042 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SncaO55042 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SncaO55042 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SncaO55042 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaO55042 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaO55042 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaO55042 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SncaO55042 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.4■□□□□ 0.22
SncaO55042 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SncaO55042 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SncaO55042 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SncaO55042 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SncaO55042 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SncaO55042 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SncaO55042 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms