Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
Npc1O35604 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Npc1O35604 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npc1O35604 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npc1O35604 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npc1O35604 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npc1O35604 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.4■□□□□ 0.7
Npc1O35604 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npc1O35604 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Npc1O35604 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Npc1O35604 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npc1O35604 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npc1O35604 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.39■□□□□ 0.69
Npc1O35604 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.39■□□□□ 0.69
Npc1O35604 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npc1O35604 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Npc1O35604 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Npc1O35604 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.38■□□□□ 0.69
Npc1O35604 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npc1O35604 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Npc1O35604 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.37■□□□□ 0.69
Npc1O35604 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Mir7075-201ENSMUST00000184187 82 ntBASIC19.37■□□□□ 0.69
Npc1O35604 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Npc1O35604 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Npc1O35604 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.36■□□□□ 0.69
Npc1O35604 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1O35604 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1O35604 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.36■□□□□ 0.69
Npc1O35604 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Npc1O35604 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.36■□□□□ 0.69
Npc1O35604 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Npc1O35604 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Npc1O35604 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Npc1O35604 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.35■□□□□ 0.69
Npc1O35604 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.35■□□□□ 0.69
Npc1O35604 Gm6139-201ENSMUST00000079261 882 ntBASIC19.35■□□□□ 0.69
Npc1O35604 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Npc1O35604 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Npc1O35604 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Npc1O35604 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Npc1O35604 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.34■□□□□ 0.69
Npc1O35604 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Npc1O35604 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Npc1O35604 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Npc1O35604 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Npc1O35604 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Npc1O35604 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1O35604 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1O35604 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Npc1O35604 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.33■□□□□ 0.69
Npc1O35604 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Npc1O35604 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.33■□□□□ 0.68
Npc1O35604 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1O35604 Mir6236-201ENSMUST00000184437 123 ntBASIC19.33■□□□□ 0.68
Npc1O35604 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1O35604 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1O35604 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Npc1O35604 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms