Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abca4O35600 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.06■□□□□ 0.64
Abca4O35600 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abca4O35600 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Abca4O35600 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.06■□□□□ 0.64
Abca4O35600 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abca4O35600 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Abca4O35600 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca4O35600 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca4O35600 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca4O35600 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.05■□□□□ 0.64
Abca4O35600 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abca4O35600 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Abca4O35600 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abca4O35600 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.04■□□□□ 0.64
Abca4O35600 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Abca4O35600 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abca4O35600 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Abca4O35600 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abca4O35600 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.04■□□□□ 0.64
Abca4O35600 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Abca4O35600 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.03■□□□□ 0.64
Abca4O35600 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Abca4O35600 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Abca4O35600 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca4O35600 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Abca4O35600 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca4O35600 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca4O35600 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.03■□□□□ 0.64
Abca4O35600 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Abca4O35600 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Abca4O35600 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Abca4O35600 Gm13146-201ENSMUST00000118508 780 ntBASIC19.02■□□□□ 0.64
Abca4O35600 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Abca4O35600 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.02■□□□□ 0.64
Abca4O35600 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Abca4O35600 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Abca4O35600 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abca4O35600 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Abca4O35600 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.02■□□□□ 0.64
Abca4O35600 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Abca4O35600 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Abca4O35600 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.01■□□□□ 0.63
Abca4O35600 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Abca4O35600 Gm27275-201ENSMUST00000184318 272 ntBASIC19.01■□□□□ 0.63
Abca4O35600 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Abca4O35600 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Abca4O35600 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Abca4O35600 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Abca4O35600 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19■□□□□ 0.63
Abca4O35600 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Abca4O35600 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.99■□□□□ 0.63
Abca4O35600 Gm6420-201ENSMUST00000193885 723 ntBASIC18.99■□□□□ 0.63
Abca4O35600 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Abca4O35600 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.99■□□□□ 0.63
Abca4O35600 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Abca4O35600 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.99■□□□□ 0.63
Abca4O35600 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.99■□□□□ 0.63
Abca4O35600 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.99■□□□□ 0.63
Abca4O35600 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.99■□□□□ 0.63
Abca4O35600 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Abca4O35600 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca4O35600 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca4O35600 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.98■□□□□ 0.63
Abca4O35600 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.98■□□□□ 0.63
Abca4O35600 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca4O35600 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Abca4O35600 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Abca4O35600 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.98■□□□□ 0.63
Abca4O35600 Gm7367-201ENSMUST00000057611 492 ntBASIC18.97■□□□□ 0.63
Abca4O35600 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Abca4O35600 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms