Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndufb11O09111 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndufb11O09111 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ndufb11O09111 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndufb11O09111 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ndufb11O09111 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Ndufb11O09111 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ndufb11O09111 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ndufb11O09111 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16■□□□□ 0.15
Ndufb11O09111 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.99■□□□□ 0.15
Ndufb11O09111 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.99■□□□□ 0.15
Ndufb11O09111 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ndufb11O09111 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.99■□□□□ 0.15
Ndufb11O09111 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ndufb11O09111 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ndufb11O09111 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ndufb11O09111 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.98■□□□□ 0.15
Ndufb11O09111 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.98■□□□□ 0.15
Ndufb11O09111 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ndufb11O09111 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ndufb11O09111 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ndufb11O09111 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Ndufb11O09111 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ndufb11O09111 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.97■□□□□ 0.15
Ndufb11O09111 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 Zfp131-205ENSMUST00000223812 663 ntBASIC15.97■□□□□ 0.15
Ndufb11O09111 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ndufb11O09111 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ndufb11O09111 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ndufb11O09111 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.96■□□□□ 0.15
Ndufb11O09111 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ndufb11O09111 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ndufb11O09111 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ndufb11O09111 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.96■□□□□ 0.14
Ndufb11O09111 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ndufb11O09111 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ndufb11O09111 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ndufb11O09111 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ndufb11O09111 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ndufb11O09111 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gm9397-201ENSMUST00000200125 605 ntBASIC15.95■□□□□ 0.14
Ndufb11O09111 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.95■□□□□ 0.14
Ndufb11O09111 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.95■□□□□ 0.14
Ndufb11O09111 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Ndufb11O09111 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ndufb11O09111 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.95■□□□□ 0.14
Ndufb11O09111 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.94■□□□□ 0.14
Ndufb11O09111 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ndufb11O09111 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms