Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn20G5E8X0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn20G5E8X0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn20G5E8X0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Cldn20G5E8X0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn20G5E8X0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn20G5E8X0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn20G5E8X0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn20G5E8X0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn20G5E8X0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn20G5E8X0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn20G5E8X0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldn20G5E8X0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn20G5E8X0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms