Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh9F8VPK8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh9F8VPK8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh9F8VPK8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh9F8VPK8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh9F8VPK8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh9F8VPK8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh9F8VPK8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh9F8VPK8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh9F8VPK8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh9F8VPK8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Etf1-202ENSMUST00000180351 108 ntBASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Gm9870-201ENSMUST00000063874 645 ntBASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh9F8VPK8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh9F8VPK8 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Gm7417-201ENSMUST00000192950 473 ntBASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh9F8VPK8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.35■□□□□ 0.85
Pcdh9F8VPK8 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms