Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm7514-201ENSMUST00000209475 934 ntBASIC28.12■■■□□ 2.09
Zc3h13E9Q784 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Zc3h13E9Q784 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Zc3h13E9Q784 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Zc3h13E9Q784 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Zc3h13E9Q784 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Zc3h13E9Q784 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Zc3h13E9Q784 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.1■■■□□ 2.09
Zc3h13E9Q784 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h13E9Q784 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Zc3h13E9Q784 Gm37415-201ENSMUST00000192265 2054 ntBASIC28.08■■■□□ 2.09
Zc3h13E9Q784 Gm10571-201ENSMUST00000097869 1638 ntBASIC28.08■■■□□ 2.09
Zc3h13E9Q784 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Zc3h13E9Q784 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Zc3h13E9Q784 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Gm10812-201ENSMUST00000099864 546 ntBASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Zc3h13E9Q784 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Zc3h13E9Q784 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h13E9Q784 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Zc3h13E9Q784 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Zc3h13E9Q784 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Zc3h13E9Q784 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Zc3h13E9Q784 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Zc3h13E9Q784 Mir6982-201ENSMUST00000184354 68 ntBASIC28.02■■■□□ 2.08
Zc3h13E9Q784 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC28.02■■■□□ 2.08
Zc3h13E9Q784 CT030146.1-201ENSMUST00000220919 217 ntBASIC28.02■■■□□ 2.08
Zc3h13E9Q784 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Zc3h13E9Q784 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Zc3h13E9Q784 Gm13836-201ENSMUST00000121159 501 ntBASIC28.01■■■□□ 2.07
Zc3h13E9Q784 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Zc3h13E9Q784 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Zc3h13E9Q784 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Zc3h13E9Q784 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC28.01■■■□□ 2.07
Zc3h13E9Q784 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC28■■■□□ 2.07
Zc3h13E9Q784 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC28■■■□□ 2.07
Zc3h13E9Q784 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
Zc3h13E9Q784 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Zc3h13E9Q784 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Zc3h13E9Q784 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC27.99■■■□□ 2.07
Zc3h13E9Q784 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Zc3h13E9Q784 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Zc3h13E9Q784 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Zc3h13E9Q784 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Gm20049-201ENSMUST00000219950 730 ntBASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Zc3h13E9Q784 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Zc3h13E9Q784 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Zc3h13E9Q784 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms