Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.11■■□□□ 1.13
Cntnap3E9PY62 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cntnap3E9PY62 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Cntnap3E9PY62 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Gm6365-201ENSMUST00000054711 744 ntBASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cntnap3E9PY62 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cntnap3E9PY62 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cntnap3E9PY62 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.09■■□□□ 1.13
Cntnap3E9PY62 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cntnap3E9PY62 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.09■■□□□ 1.13
Cntnap3E9PY62 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Cntnap3E9PY62 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cntnap3E9PY62 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.08■■□□□ 1.13
Cntnap3E9PY62 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cntnap3E9PY62 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Cntnap3E9PY62 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cntnap3E9PY62 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cntnap3E9PY62 Gm7290-201ENSMUST00000104990 617 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Gm12918-201ENSMUST00000120234 636 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Gm15710-201ENSMUST00000121821 636 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Gm5075-201ENSMUST00000196916 622 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cntnap3E9PY62 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.05■■□□□ 1.12
Cntnap3E9PY62 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cntnap3E9PY62 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cntnap3E9PY62 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.03■■□□□ 1.12
Cntnap3E9PY62 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cntnap3E9PY62 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cntnap3E9PY62 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Cntnap3E9PY62 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.02■■□□□ 1.12
Cntnap3E9PY62 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cntnap3E9PY62 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cntnap3E9PY62 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Cntnap3E9PY62 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cntnap3E9PY62 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Cntnap3E9PY62 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cntnap3E9PY62 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22■■□□□ 1.11
Cntnap3E9PY62 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cntnap3E9PY62 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cntnap3E9PY62 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Cntnap3E9PY62 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Cntnap3E9PY62 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cntnap3E9PY62 Gm6576-201ENSMUST00000169678 883 ntBASIC21.99■■□□□ 1.11
Cntnap3E9PY62 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.99■■□□□ 1.11
Cntnap3E9PY62 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cntnap3E9PY62 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms