Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slc28a1E9PXX9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc28a1E9PXX9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Slc28a1E9PXX9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Gm10420-201ENSMUST00000121713 882 ntBASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc28a1E9PXX9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc28a1E9PXX9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Slc28a1E9PXX9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc28a1E9PXX9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc28a1E9PXX9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc28a1E9PXX9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc28a1E9PXX9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms