Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a5A6H584 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Gm37055-201ENSMUST00000191866 133 ntBASIC15.34■□□□□ 0.05
Col6a5A6H584 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a5A6H584 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col6a5A6H584 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a5A6H584 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.33■□□□□ 0.05
Col6a5A6H584 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a5A6H584 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.33■□□□□ 0.05
Col6a5A6H584 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a5A6H584 AC153890.1-201ENSMUST00000220021 2469 ntBASIC15.33■□□□□ 0.05
Col6a5A6H584 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a5A6H584 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a5A6H584 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a5A6H584 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a5A6H584 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.33■□□□□ 0.04
Col6a5A6H584 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a5A6H584 Gm27275-201ENSMUST00000184318 272 ntBASIC15.33■□□□□ 0.04
Col6a5A6H584 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a5A6H584 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a5A6H584 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.32■□□□□ 0.04
Col6a5A6H584 Gm9987-201ENSMUST00000069768 567 ntBASIC15.32■□□□□ 0.04
Col6a5A6H584 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a5A6H584 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.31■□□□□ 0.04
Col6a5A6H584 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col6a5A6H584 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Col6a5A6H584 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a5A6H584 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.3■□□□□ 0.04
Col6a5A6H584 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col6a5A6H584 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.29■□□□□ 0.04
Col6a5A6H584 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.29■□□□□ 0.04
Col6a5A6H584 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.29■□□□□ 0.04
Col6a5A6H584 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col6a5A6H584 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col6a5A6H584 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a5A6H584 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col6a5A6H584 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a5A6H584 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a5A6H584 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a5A6H584 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a5A6H584 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.28■□□□□ 0.04
Col6a5A6H584 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col6a5A6H584 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col6a5A6H584 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.27■□□□□ 0.04
Col6a5A6H584 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col6a5A6H584 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a5A6H584 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col6a5A6H584 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms