Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm7290-201ENSMUST00000104990 617 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm12918-201ENSMUST00000120234 636 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm15710-201ENSMUST00000121821 636 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm5075-201ENSMUST00000196916 622 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Gm12896-201ENSMUST00000118430 226 ntBASIC10.78□□□□□ -0.68
Ubr4A2AN08 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.78□□□□□ -0.68
Ubr4A2AN08 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ubr4A2AN08 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ubr4A2AN08 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ubr4A2AN08 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ubr4A2AN08 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ubr4A2AN08 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC10.77□□□□□ -0.68
Ubr4A2AN08 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ubr4A2AN08 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC10.77□□□□□ -0.69
Ubr4A2AN08 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC10.77□□□□□ -0.69
Ubr4A2AN08 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ubr4A2AN08 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ubr4A2AN08 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ubr4A2AN08 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ubr4A2AN08 Gm17971-201ENSMUST00000190239 806 ntBASIC10.76□□□□□ -0.69
Ubr4A2AN08 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.76□□□□□ -0.69
Ubr4A2AN08 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ubr4A2AN08 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Gm5643-201ENSMUST00000117081 966 ntBASIC10.75□□□□□ -0.69
Ubr4A2AN08 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.75□□□□□ -0.69
Ubr4A2AN08 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ubr4A2AN08 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC10.74□□□□□ -0.69
Ubr4A2AN08 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.74□□□□□ -0.69
Ubr4A2AN08 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ubr4A2AN08 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC10.73□□□□□ -0.69
Ubr4A2AN08 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Mir5122-201ENSMUST00000175004 89 ntBASIC10.73□□□□□ -0.69
Ubr4A2AN08 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms