Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav12-1A0N8R1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav12-1A0N8R1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav12-1A0N8R1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav12-1A0N8R1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav12-1A0N8R1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Gm40881-201ENSMUST00000223397 166 ntBASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav12-1A0N8R1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav12-1A0N8R1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav12-1A0N8R1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Mir6236-201ENSMUST00000184437 123 ntBASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav12-1A0N8R1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav12-1A0N8R1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav12-1A0N8R1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms