Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lnp1A0A1B0GSK3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lnp1A0A1B0GSK3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lnp1A0A1B0GSK3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lnp1A0A1B0GSK3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.58■□□□□ 0.24
Lnp1A0A1B0GSK3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lnp1A0A1B0GSK3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lnp1A0A1B0GSK3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Lnp1A0A1B0GSK3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lnp1A0A1B0GSK3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.53■□□□□ 0.24
Lnp1A0A1B0GSK3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lnp1A0A1B0GSK3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lnp1A0A1B0GSK3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.52■□□□□ 0.23
Lnp1A0A1B0GSK3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lnp1A0A1B0GSK3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lnp1A0A1B0GSK3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms