Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Gm3880A0A1B0GSB3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Gm3880A0A1B0GSB3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Hsf1-204ENSMUST00000226872 2104 ntBASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm3880A0A1B0GSB3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Gm42900-201ENSMUST00000197184 2167 ntBASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm3880A0A1B0GSB3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm3880A0A1B0GSB3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm3880A0A1B0GSB3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 AC166822.3-201ENSMUST00000227394 661 ntBASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm3880A0A1B0GSB3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3880A0A1B0GSB3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms