Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Igkv1-88A0A140T8N1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm12366-201ENSMUST00000121722 873 ntBASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm5786-201ENSMUST00000085368 882 ntBASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv1-88A0A140T8N1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv1-88A0A140T8N1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv1-88A0A140T8N1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv1-88A0A140T8N1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Golph3-202ENSMUST00000226517 2359 ntBASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv1-88A0A140T8N1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms