Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl23a-ps3A0A140T8M7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm45102-201ENSMUST00000207427 857 ntBASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm14117-201ENSMUST00000122417 843 ntBASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm9959-201ENSMUST00000068277 390 ntBASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rpl23a-ps3A0A140T8M7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms