Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc194A0A140LIT1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc194A0A140LIT1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc194A0A140LIT1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
Ccdc194A0A140LIT1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc194A0A140LIT1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc194A0A140LIT1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc194A0A140LIT1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Gm7417-201ENSMUST00000192950 473 ntBASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc194A0A140LIT1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc194A0A140LIT1 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Gm5812-201ENSMUST00000061073 957 ntBASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc194A0A140LIT1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms