Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav11A0A0B4J1J9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav11A0A0B4J1J9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav11A0A0B4J1J9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav11A0A0B4J1J9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav11A0A0B4J1J9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Gm10420-201ENSMUST00000121713 882 ntBASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav11A0A0B4J1J9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms