Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igkv16-104A0A0B4J1I1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gm12933-201ENSMUST00000120203 872 ntBASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gm10602-201ENSMUST00000098239 609 ntBASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.33■□□□□ 0.85
Igkv16-104A0A0B4J1I1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv16-104A0A0B4J1I1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv16-104A0A0B4J1I1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.32■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv16-104A0A0B4J1I1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.28■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.28■□□□□ 0.84
Igkv16-104A0A0B4J1I1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms