Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv20A0A0B4J1H5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.82■□□□□ 0.44
Trbv20A0A0B4J1H5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.81■□□□□ 0.44
Trbv20A0A0B4J1H5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv20A0A0B4J1H5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv20A0A0B4J1H5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trbv20A0A0B4J1H5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv20A0A0B4J1H5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv20A0A0B4J1H5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv20A0A0B4J1H5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv20A0A0B4J1H5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv20A0A0B4J1H5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv20A0A0B4J1H5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv20A0A0B4J1H5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv20A0A0B4J1H5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv20A0A0B4J1H5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv20A0A0B4J1H5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms