Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv19A0A0B4J1H4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm7417-201ENSMUST00000192950 473 ntBASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbv19A0A0B4J1H4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm15546-201ENSMUST00000122095 826 ntBASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm9870-201ENSMUST00000063874 645 ntBASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv19A0A0B4J1H4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Trbv19A0A0B4J1H4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv19A0A0B4J1H4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv19A0A0B4J1H4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv19A0A0B4J1H4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Golph3-202ENSMUST00000226517 2359 ntBASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv19A0A0B4J1H4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv19A0A0B4J1H4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv19A0A0B4J1H4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Etf1-202ENSMUST00000180351 108 ntBASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Mir6236-201ENSMUST00000184437 123 ntBASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Gm43530-201ENSMUST00000195920 274 ntBASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv19A0A0B4J1H4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms