Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv5A0A0B4J1G9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv5A0A0B4J1G9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv5A0A0B4J1G9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv5A0A0B4J1G9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv5A0A0B4J1G9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv5A0A0B4J1G9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv5A0A0B4J1G9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Gm6311-201ENSMUST00000073790 878 ntBASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms