Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-36A0A0A6YXT2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Mir6236-201ENSMUST00000184437 123 ntBASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm9870-201ENSMUST00000063874 645 ntBASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm43530-201ENSMUST00000195920 274 ntBASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm15820-201ENSMUST00000201566 728 ntBASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-36A0A0A6YXT2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms