Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm11421-201ENSMUST00000122124 294 ntBASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-43A0A0A6YXN5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gm10493-201ENSMUST00000097270 612 ntBASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-43A0A0A6YXN5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms