Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.24■□□□□ 0.51
Trbc1A0A0A6YWV4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbc1A0A0A6YWV4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbc1A0A0A6YWV4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbc1A0A0A6YWV4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trbc1A0A0A6YWV4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm27454-201ENSMUST00000185090 204 ntBASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbc1A0A0A6YWV4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbc1A0A0A6YWV4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms