Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-7A0A075B6A6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-7A0A075B6A6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6n-7A0A075B6A6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trav6n-7A0A075B6A6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-7A0A075B6A6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-7A0A075B6A6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm43137-201ENSMUST00000198052 594 ntBASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav6n-7A0A075B6A6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-7A0A075B6A6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm12821-201ENSMUST00000120022 600 ntBASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-7A0A075B6A6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-7A0A075B6A6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6n-7A0A075B6A6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms