Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8-1A0A075B641 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Gm7432-201ENSMUST00000210343 879 ntBASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8-1A0A075B641 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8-1A0A075B641 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Golph3-205ENSMUST00000228671 2842 ntBASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8-1A0A075B641 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Gm11599-201ENSMUST00000118720 878 ntBASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8-1A0A075B641 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav8-1A0A075B641 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8-1A0A075B641 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8-1A0A075B641 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms